Contents [0/42] |
Are You In The Right Room? [1/42] |
Course: CSC373/406 (Computer Systems I)
Instructor: James Riely
Overview of Today's Class [2/42] |
Admin: Course Overview [3/42] |
This is a course on computer systems topics, focusing on machine-level programming and architecture and their relevance for application programming. We will discuss:
Admin: Course Objectives [4/42] |
By the end of this class you will be a much better programmer.
By the end of this class you will understand how computer hardware works.
By the end of this class you will be ready for
Admin: Prerequisites [5/42] |
You need some programming background for this class. This can be fulfilled by any of the following:
We will not program in Java, Python or C++. We will be using C. We will cover necessary C topics as we need them, but I will assume that you already:
Your knowledge of these topics in Java, Python or C++ will easily transfer to C and will be critical to your success in this class.
Admin: Expectations [6/42] |
We will be using several unfamiliar tools:
You will work on three interesting (and time consuming) labs.
To succeed in the class you must engage the material actively. You will need to
Time is of the essence! You need to work early and ask questions early.
If you delay, you will be lost in incomprehensible morass!
Admin: Textbooks [7/42] |
Required Books
Computer Systems: A Programmers Perspective, Second Edition [Amazon, AddAll]
by Randal E. Bryant and David R. O'Hallaron (Prentice Hall, 2010)
Be sure to get the 2nd edition.
Online companion to the book: http://csapp.cs.cmu.edu/
System Programming with C and Unix [Amazon, AddAll]
by Adam Hoover (Addison-Wesley, 2010)
Online companion to the book: http://www.pearsonhighered.com/educator/product/System-Programming-with-C-and-Unix/9780136067122.page
The chapters covered in 373 are:
We do not cover any of the "optional" sections (indicated with *)
Admin: Course Homepage [8/42] |
Course homepage: http://fpl.cs.depaul.edu/jriely/class/373/publish
Admin: Mailing List [9/42] |
You must subscribe to the course mailing list. Do it as soon as possible.
http://groups.google.com/group/csc373spring2012
Admin: Assessment [10/42] |
There will be weekly quizzes (for in-class students), three labs, a midterm, and a final. The course grade will be computed as follows:
PLuS students may opt to skip weekly quizzes.
Numerical grades correspond to letter grades roughly as follows:
93-100 = A 90-92 = A- 88-89 = B+ 83-87 = B 80-82 = B- etc...
In-class students must attend class each week in order to receive points for the weekly quiz. There will be no makeup quizzes, but I will drop the lowest two quiz scores; therefore, you may miss up to two classes without affecting your grade.
Quizzes will last five-ten minutes, and will be given immediately before the break. Quizzes will be based on the self-test problems in the text and will cover material from preceding classes, or from the first half of class. (You are expected to the read the material before class.) The first weekly quiz will cover prerequisite material.
Quizzes will be posted for DL students to do at home, but will not be considered in determining grades.
The midterm and final will be cumulative. You must earn a passing grade on the midterm and final to pass the course.
No late labs will be accepted. There will be no make-up exams, make-up quizzes, nor extra credit assignments. If there is an extreme emergency and you must miss an exam, you must notify me in advance and provide documented evidence of the emergency.
Students in DL sections may take the course remotely. They may take the exam at times different from the in class section, usually within a few days. Exact details will be provided on COL closer to the exam date.
DePaul's academic integrity policy
Admin: Attendance [11/42] |
You are responsible for understanding the material presented in class.
You are responsible for any announcements made in class or on the class mailing list.
If you are in the DL section or miss class, you should watch the lecture within 24 hours (ie, the day after the in class lecture.)
In-class students must attend class each week in order to receive credit for the quiz.
In-class students must attend the midterm and final exams.
A medical note will be required for an absence from exams. Business trips or vacations are not valid reasons for missing the exams.
Block out these dates now!
Online students can take exams remotely. Online dates will likely include the weekend before the in class date.
Class materials and recorded lectures are available online. Exams are proctored.
Read the policies here:
http://www.cdm.depaul.edu/onlinelearning/Pages/OnlinePolicies.aspx
If you live in Chicago, you can take the exams at the Loop or Suburban campuses. If you live outside the Chicago area, you will need to find a proctor.
Your online section is paired with an on-campus section. These classes are recorded and uploaded into the Course Management system so you can view them within 24 hours of the live class. The first class is 2011/03/27-29. The lecture will be available online the following day.
Admin: Contact Information [12/42] |
Instructor: | James Riely |
Home Page: | http://fpl.cs.depaul.edu/jriely |
Email: | jriely@cs.depaul.edu |
Phone: | 1.312.362.5251 |
Address: | School of Computing, DePaul University |
243 South Wabash Avenue | |
Chicago, IL 60604-2301 | |
Office: | CDM 846 |
Office Hours: | Tue/Thu 3:00pm-4:00pm in CDM 846 |
Class Page: | http://fpl.cs.depaul.edu/jriely/class/373/publish |
Class Hours: | Tue/Thu 1:30-3:00pm in CDM 220 [Section 601] |
Online, Anytime [Section 610] |
My coordinates:
Contact by phone:
Contact by email:
Labs: Riely373 Server [13/42] |
For labs, we will use a server running linux.
The server name is riely373.cdm.depaul.edu. The ip address is 140.192.39.11
If you prefer to refer to the server by a shorter name, such as riely373, then add the following line to /etc/hosts (linux, OSX) or C:\WINDOWS\System32\drivers\etc\hosts (windows):
140.192.39.11 riely373
The hosts file will then look something like this:
127.0.0.1 localhost 140.192.39.11 riely373
Don't delete any entries unless you know what you are doing!
In the rest of the notes, I will use the server name riely373 rather than the ip address. You should substitute the ip address when attempting to connect with the server.
The server is behind a firewall which blocks all access except using ssh.
I have given all enrolled students an account on the machine.
Your account name is the first three letters of you last name, all lowercase. It may also include your first initial. It's one of these: ald alh all ber bon bre bur cat cou ega esp fan fed hay hoo kra kur kva lea luk maj mei nil pau pol porf porp sch spe tho wag wil wir xia
Your password is your depaul id number, including leading zeros.
If your name is not listed, email me and I will make an account for you.
These accounts are temporary and will be deleted when the class is finished. I reserve the right to read any files that you post to the account.
In the rest of the notes, I will use the username stu. You should substitute your own username when attempting to connect with the server.
You can access the machine by going to a command line and typing:
ssh stu@riely373.cdm.depaul.edu
Using PuTTY, connect to server riely373.cdm.depaul.edu with username stu. For FileZilla, use port 22.
Labs: SSH [14/42] |
To do the homeworks, you will need an ssh client.
For a gui sftp client (all platforms), get FileZilla
Windows: On windows, install PuTTY (use putty-???-installer.exe).
Windows explorer does not support sftp.
Ubunutu Linux: The command line programs ssh, scp and sftp are installed by
sudo apt-get install openssh-client
File browser supports sftp. Select Go->Location (C-l). In the location bar, type sftp://username@riely373.cdm.depaul.edu/.
OSX: The command line programs ssh, scp and sftp come pre-installed on OSX.
Mac Finder does not support sftp.
To get drag/drop Finder integration is a bit of a pain. To do it, install MacFUSE and sshfs. (Just drag sshfs.app to /Applications.) To mount a directory, run sshfs.app. (This copy of sshfs is private; the public verion, available here, no longer contains the very simple gui.)
Labs: GCC [15/42] |
We will use gcc on riely373.
Some of you may wish to run gcc locally on your home computer.
Windows: There are many versions of gnu utilities for windows, including MinGW, Cygwin, and GNUwin32
Unless you already use cygwin, I recommend that you install MinGW (use the installer executable).
Ubunutu Linux: sudo apt-get install build-essentials
OSX: Install Xcode (also on your installation DVD).
Labs: More linux/C/x86 links [16/42] |
More linux/C links
Nice one page summary of some more advanced commands.
Tutorial examples organized by functionality.
linux: ls: list the contents of a directory [17/42] |
Command: ls
Arguments: Optional list of files and or directory names
Options: -l
Description: Lists the specified files and or directories. For a directory, all its files and directories are listed. If no file or directory is specified, the current directory is assumed.
Example:
$ ls csc373 mail nachos-3.4.tar test examples nachos-3.4 new test.txt
linux: pwd: Display current directory name (print working directory) [18/42] |
Example:
$ pwd /home/prof
linux: rm: Delete Files/Directories [19/42] |
Command: rm
Arguments: file list
Options: -i -r
Description: Removes (deletes) the specified files
-i Ask before removing each file (Good idea since it is not possible to reverse a removal) -r Recursively remove directories and subdirectories in the list. Files will be removed in these directories first and then the directory itself. (Useful but dangerous)]]
Example:
$ rm test.txt $ rm -r test
linux: mv: Rename a file/directory [20/42] |
Arguments: existing_file new_file
Options: -i
Description: Renames existing_file to have the name new_file -i Prompts if mv would overwrite an existing file.
Example:
$ ls code output.c test.cpp thrd.c~ file sample_busy test.txt homework2 sample_busy.cpp thrd output test thrd.c $ mv output.c input.c $ ls code output test.cpp thrd.c~ file sample_busy test.txt homework2 sample_busy.cpp thrd input.c test thrd.c
linux: cp: Copy a file [21/42] |
Arguments: existing_file new_copy
Description: Copy existing_file to the file new_copy. If new_copy doesn't exist, create it. If it does exist, first delete its contents.
If new_copy is a directory, a copy of existing_file is created in directory new_copy with the same file name - existing_file.
Example:
$ cp sample.cpp prog1.cpp
linux: mkdir: Create a directory [22/42] |
Arguments: new_subdirectory_name
Description: Create a subdirectory of the current directory
Example:
$ mkdir hw1
linux: cd: Change the current directory [23/42] |
Arguments: target_directory
Options:
Description: Change the current directory (working directory) to the specified target_directory. If no target_directory is specified, change to the login/home directory.
Example:
$ cd hw1
The following changes the current directory to the parent directory:
$ cd ..
linux: Viewing a File [24/42] |
There are several tools available for viewing files. The most popular command is "less" invoked as follows:
$ less foo
To
scroll the contents of a file to the screen, you can use the cat
command. This command gets its name
from concatenate: it reads its input file name(s) and writes them to the
screen. If you give it more than one file name:
$ cat foo bar
then
cat will first write foo to the screen and then bar. Redirecting this output to
a file (we won't go into redirection here)
like this:
$ cat foo bar > bas
would give you a file named bas whose content is the contents of bar concatenated to foo. This is a good way to add files together.
linux: Printing a File [25/42] |
To print a file, you'll need to use ftp or the secure shell client to transfer the file to a PC. You can then print the file as you would any other file on the PC.
linux: Unix online Manual [26/42] |
To view the unix online manual, you need to know the exact name of a manual topic; e.g., fork. In some cases you may not know the exact name. You can try the man command with the -k option (for keyword)
$ man -k fork
The output shows all manual topic names in the first column related to the keyword entered (fork).
Once you know the name of the manual page for a topic use the man command again with that specific topic:
$ man fork
linux: Unix text editors [27/42] |
To edit your programs, you will need a text editor.
nano is the easiest to use.
Having said that, the most popular editors in UNIX/Linux
are vim
and emacs
. You can learn about vi
at
http://heather.cs.ucdavis.edu/~matloff/UnixAndC/Editors/ViIntro.html
and emacs
at
http://heather.cs.ucdavis.edu/~matloff/UnixAndC/Editors/Emacs.html
Here is a short primer on emacs. To start emacs type
$emacs
To open a file file.c using emacs, type
$emacs file.c
You can start editing know. When you want to save your file, type
Ctrl-X Ctrl-S (This means pressing the Ctrl key and pressing x and then
s, while still pressing the Ctrl key)
To save a file under a different name, type
Ctrl-X Ctrl-W
To exit emacs, type
Ctrl-X Ctrl-C
Here is a short list of important emacs editing commands
To move the cursor forward or backward, type
Ctrl-F or Ctrl-B
respectively.To move the cursor up or down, type
Ctrl-P and Ctrl-N
respectively. To delete a character pointed to by the cursor, type
Ctrl-D
To cut and paste, move the cursor to the first character of the part you
want to cut and paste. Then type
Ctrl-SPACE (SPACE is the space bar)
Then move the cursor down to the last character of the part you want to
cut. Then type
Ctrl-W
to cut the text. You can then move the cursor to the position where you
want to paste, and type
Ctrl-Y
to paste. You can paste the cut text again and again with Ctrl-Y.
You should be able to modify the properties of the VT102 terminal
emulator in SSH to customize some of teh key bindings.
For additional info about UNIX/Linux go to Norman
Matloff's intro to Unix
Homework for Thursday [28/42] |
Datalab (bitNor)
C: Compiling C programs [29/42] |
file:hello.c [source]
00001: #include <stdio.h> 00002: 00003: int main() 00004: { 00005: printf("hello, world\n"); 00006: } 00007:
To compile a single file C program in a file named hello.c use the gcc compiler.
$ gcc hello.c -o hello
This compiles the program hello.c, links it with any standard c library routines called (e.g. i/o routines) and produces the executable file named hello.
Now run hello:
$ ./hello
C: Displaying binary data [30/42] |
The following unix commands can make some sense of binary data
wc
xxd
strings
objdump
C: Hex [31/42] |
Computer organization is based on the byte
4 bits == nibble 8 bits == byte 32 bits == word (32 bit machine) 64 bits == word (64 bit machine) ---------------------- DECIMAL | HEX | BINARY --------|-----|------- 0 | 0 | 0000 1 | 1 | 0001 2 | 2 | 0010 3 | 3 | 0011 | | 4 | 4 | 0100 5 | 5 | 0101 6 | 6 | 0110 7 | 7 | 0111 | | 8 | 8 | 1000 9 | 9 | 1001 10 | A | 1010 11 | B | 1011 | | 12 | C | 1100 13 | D | 1101 14 | E | 1110 15 | F | 1111
C: Formatting [32/42] |
file:hello.c [source]
00001: #include <stdio.h> 00002: 00003: int main() 00004: { 00005: printf("hello, world\n"); 00006: } 00007:
#include
is a preprocessor directive: it literally
includes other code into your program (prototypes for constants,
functions, etc.), which then gets compiled as though it were part of what
you wrote main
scanf
for input, and printf
for output
char %c char[] %s // string int %d // signed decimal (base 10) int %u // unsigned decimal (base 10) int %x // unsigned hexidecimal (base 16) int %p // pointer (like %x but with leading 0x) float %f
return
statement at the end
of the program: return 0;
file:format.c [source]
00001: #include <stdio.h> 00002: 00003: int main() 00004: { 00005: printf ("Characters: %c %c \n", 'a', 65); 00006: printf ("Characters: %d %d \n", 'a', 65); 00007: printf ("Decimals: %d %d\n", 1977, 65000000); 00008: printf ("Preceding with blanks: %10d \n", 1977); 00009: printf ("Preceding with zeros: %010d \n", 1977); 00010: printf ("Some different radixes: %d %x %o %#x %#o \n", 00011: 100, 100, 100, 100, 100); 00012: printf ("floats: %4.2f %+.0e %E \n", 3.1416, 3.1416, 3.1416); 00013: printf ("%s \n", "A string"); 00014: int x; 00015: float y; 00016: printf("Enter a decimal and a floating point number\n"); 00017: scanf("%d %f", &x, &y); 00018: printf("You entered %d %lf\n", x, y); 00019: 00020: char s[1]; 00021: printf("Enter a string\n"); 00022: scanf("%s", s); 00023: printf("You entered %s\n", s); 00024: return 0; 00025: } 00026:
C: Boolean algebra [33/42] |
1 and 0 are like true and false
C: Boolean algebra [34/42] |
1 and 0 are like true and false
C: Logic in C [35/42] |
C: Logical Operations in C [36/42] |
! && ||
char short int long
!1 == 0 !!1 == 1 !0 == 1 !!0 == 0 !55 == 0 !!55 ==
C: Bit-Level Operations in C [37/42] |
~ & | ^
char short int long
Examples using one byte. The examples show the number in base-2 (binary) notation.
x == 01000001 ~x == 10111110 x == 00000000 ~x == 11111111 x == 01101001 y == 01010101 x&y == 01000001 x == 01101001 y == 01010101 x|y == 01111101 x == 01101001 y == 01010101 x^y == 00111100
the following hold for any x
~(~x) == x
C: Masks [38/42] |
the following hold for any x
x & x == x x & 00000000 == 00000000 x & 11111111 == x x | x == x x | 00000000 == x x | 11111111 == 11111111
What about
x & 00001111 == x | 00001111 ==
C: Using XOR [39/42] |
XOR is important in cryptography
the following hold for any x and y
x ^ x == 0 x ^ 00000000 == x x ^ 11111111 == ~x x ^ y == (~x | ~y) & ~(x & y) x ^ y == (x & ~y) | (~x & y)
C: Shift Operations [40/42] |
Left shift:
x == 01100010 x<<1 == 11000100 x<<2 == 10001000 x<<3 == 00010000 x<<4 == 00100000 x<<5 == 01000000 x<<6 == 10000000 x<<7 == 00000000 x<<8 == 00000000
Right shift:
(logical) (arithmetic) x == 01100010 01100010 x>>1 == 00110001 00110001 x>>2 == 00011000 00011000 x>>3 == 00001100 00001100 x>>4 == 00000110 00000110 x>>5 == 00000011 00000011 x>>6 == 00000001 00000001 x>>7 == 00000000 00000000 x>>8 == 00000000 00000000 (logical) (arithmetic) x == 11100010 11100010 x>>1 == 01110001 11110001 x>>2 == 00111000 11111000 x>>3 == 00011100 11111100 x>>4 == 00001110 11111110 x>>5 == 00000111 11111111 x>>6 == 00000011 11111111 x>>7 == 00000001 11111111 x>>8 == 00000000 11111111
C: Bit Operations [41/42] |
file:bitops.c [source]
00001: // shows the effect of various bit operations 00002: #include <stdio.h> 00003: 00004: #include "show-bytes.c" 00005: int main() { 00006: int x,y; 00007: unsigned int z; 00008: printf("Enter 2 numbers\n"); 00009: scanf("%x %x", &x, &y); 00010: z = x; 00011: printf("x in binary is "); 00012: print_binary(x); 00013: printf("\ny in binary is "); 00014: print_binary(y); 00015: printf("\n\nx & y = "); 00016: print_binary(x&y); 00017: printf("\nx | y = "); 00018: print_binary(x|y); 00019: printf("\nx ^ y = "); 00020: print_binary(x^y); 00021: printf("\n\nx = "); 00022: print_binary(x); 00023: printf("\n~x = "); 00024: print_binary(~x); 00025: printf("\nx<<1 = "); 00026: print_binary(x << 1); 00027: printf("\nx<<2 = "); 00028: print_binary(x << 2); 00029: printf("\nx>>3 = "); 00030: print_binary(x>>3); 00031: printf("\n\nx in decimal = %d\n", x); 00032: printf("~x in decimal = %d\n", ~x); 00033: printf("x<<1 in decimal = %d\n", x<<1); 00034: printf("x<<2 in decimal = %d\n", x<<2); 00035: printf("x>>1 in decimal = %d\n", x>>1); 00036: printf("\n"); 00037: printf("\nz = "); 00038: print_binary(z); 00039: printf("\n~z = "); 00040: print_binary(~z); 00041: printf("\nz<<1 = "); 00042: print_binary(z << 1); 00043: printf("\nz<<2 = "); 00044: print_binary(z << 2); 00045: printf("\nz>>3 = "); 00046: print_binary(z>>3); 00047: printf("\n\nz in decimal = %u\n", z); 00048: printf("~z in decimal = %u\n", ~z); 00049: printf("z<<1 in decimal = %u\n", z<<1); 00050: printf("z<<2 in decimal = %u\n", z<<2); 00051: printf("z>>1 in decimal = %u\n", z>>1); 00052: printf("\n"); 00053: return 0; 00054: } 00055:
Homework for Tuesday [42/42] |
Datalab (bitXor)
Revised: 2008/03/17 13:01